Astid primers for phylogeneticsSHULAEV, VD. J. SARGENT, R. N. CROWHURST, T. C. MOCKLER, O. FOLKERTS, A. L. DELCHER, P. JAISWAL, ET AL.The genome of PubMed ID:http://www.ncbi.nlm.nih.gov/pubmed/24593993?dopt=Abstract woodland strawberry (Fragaria vesca). 
Nature Genetics :TANG, JH. XIA, M. CAO, X. ZHANG, W. ZENG, S. HU, W. TONG, ET AL.A comparison of rice chloroplast genomes. Plant Physiology :TIMME, R. EJ. V. KUEHL, J. L. BOORE, AND R. K. JANSEN.A comparative analysis in the Lactuca and Helianthus (Asteraceae) plastid genomes: Identification of divergent regions and categorization of shared repeats. American Journal of Botany :XU, QG. XIONG, P. LI, F. HE, Y. HUANG, K. WANG, Z. LI, AND J. HUA.Evaluation of total nucleotide sequences of Gossypium chloroplast genomes: Origin and eution of allotetraploids. One particular : Ejournal.pone YANG, J. BM. TANG, H. T. LI, Z. R. ZHANG, AND D. Z. LI.Total chloroplast genome with the genus Cymbidium: Lights into the species identification, phylogenetic implications and population genetic analyses. BMC Eutionary Biology : .APPENDIXComplete chloroplast genome sequences applied to design and style universal flowering plant primers for plastid noncoding regions. Format: Organism; GenBank quantity and version; publication. Basal Dicot Grade:Amborella trichopoda Baill NC_ Goremykin et al. Monocots:Oryza nivara Sharma Shastry; NC_ Shahid Masood et al.Oryza sativa L NC_ Hiratsuka et al.Saccharum hybrid; NC_ Calsa et al.Saccharum officinarum L NC_ Asano et al.Triticum aestivum L NC_ MedChemExpress IQ-1 Ogihara et al.Zea mays L NC_ Maier et al. Eudicots:Arabidopsis thaliana (L.) Heynh NC_ Sato et al.Atropa belladonna L 
NC_ Schmitz-Linneweber et al.Calycanthus floridus L. var. glaucus (Willd.) Torr. A. Gray; NC_ Goremykin et alunpublished (Goremykin, VK. Hirsch-Ernst, S. Wolfl, and F. Acumapimod site Hellwig. Complete structure of your chloroplast genome of Calycanthus fertilis. Direct GenBank submission July).Lotus japonicus (Regel) K. Larsen; AP Kato et al.Medicago truncatula Gaertn NC_ Lin et alunpublished (Lin, SH. Wu, H. Jia, P. Zhang, R. Dixon, G. Might, R. Gonzales, and B. A. Roe. Medicago truncatula wide variety Jema Long A- chloroplast, total sequence. Direct GenBank submission August).Nicotiana tabacum L Z Shinozaki et al. Note: this sequence has been updated because this article was published.Nymphaea alba L NC_ Goremykin et al.Oenothera elata Kunth subsp. hookeri (Torr. A. Gray) W. Dietr. W. L. Wagner; NC_ Hupfer et al. Note: this sequence has been updated due to the fact this article was published.Spinacia oleracea L NC_ Schmitz-Linneweber et al.http:bioone.orgloiapps ofApplications in Plant Sciences : doi:.apps.APPENDIX .Prince–Plastid primers for phylogeneticsComparison of chloroplast regions with published primer pairs.Genomic region trnH(GUG)-psbA psbA exon psbA-trnK(UUU) trnK(UUU)-matK matK exon matK-trnK trnK(UUU)-rps rps intron rps-trnQ(UUG) trnQ(UUG)-psbK psbK-trnS(GCU) trnS(GCU)-trnG(UCC) and intron trnG(UCC) intron trnG(UCC)-atpA atpA exon atpA-atpF atpF intron atpF-atpH atpH-atpI atpI exon atpI-rps rps exon rps-rpoC rpoC-rpoC rpoC intronexon rpoC exon rpoB exon rpoB-trnC(GCU) trnC(GCU)-ycf trnC(GCU)-petN petN-trnD petN-psbM ycf-psbM psbM-trnD(GUC) trnD(GUC)-trnT(GGU) trnT(GGU)-psbD psbD exon psbC exon psbC-psbZ trnS(UGA)-trnG(GCC) trnG(GCC)-rpS trnS(UGA)-trnfM trnS(UGA)-psbZ psbZ-trnfM(CAU) trnfM(CAU)-psaB psaB exon psaA exon psaA-ycf ycf intron ycf intron ycf-trnS(GGA) ycf-rps trnS(GGA)-rpS-trnT(UGU) rpS-trnT(UGU) trnT(UGU)-trnL(UAA) trnL(UAA) intron trnL(UAA)-trnF(GAA) trnL(UAA)-ndhJ trnF(GAA)-ndhJ ndhJ-ndhC ndhC-trnV(UAC).Astid primers for phylogeneticsSHULAEV, VD. J. SARGENT, R. N. CROWHURST, T. C. MOCKLER, O. FOLKERTS, A. L. DELCHER, P. JAISWAL, ET AL.The genome of PubMed ID:http://www.ncbi.nlm.nih.gov/pubmed/24593993?dopt=Abstract woodland strawberry (Fragaria vesca). Nature Genetics :TANG, JH. XIA, M. CAO, X. ZHANG, W. ZENG, S. HU, W. TONG, ET AL.A comparison of rice chloroplast genomes. Plant Physiology :TIMME, R. EJ. V. KUEHL, J. L. BOORE, AND R. K. JANSEN.A comparative analysis on the Lactuca and Helianthus (Asteraceae) plastid genomes: Identification of divergent regions and categorization of shared repeats. American Journal of Botany :XU, QG. XIONG, P. LI, F. HE, Y. HUANG, K. WANG, Z. LI, AND J. HUA.Analysis of total nucleotide sequences of Gossypium chloroplast genomes: Origin and eution of allotetraploids. A single : Ejournal.pone YANG, J. BM. TANG, H. T. LI, Z. R. ZHANG, AND D. Z. LI.Comprehensive chloroplast genome in the genus Cymbidium: Lights into the species identification, phylogenetic implications and population genetic analyses. BMC Eutionary Biology : .APPENDIXComplete chloroplast genome sequences utilized to design universal flowering plant primers for plastid noncoding regions. Format: Organism; GenBank quantity and version; publication. Basal Dicot Grade:Amborella trichopoda Baill NC_ Goremykin et al. Monocots:Oryza nivara Sharma Shastry; NC_ Shahid Masood et al.Oryza sativa L NC_ Hiratsuka et al.Saccharum hybrid; NC_ Calsa et al.Saccharum officinarum L NC_ Asano et al.Triticum aestivum L NC_ Ogihara et al.Zea mays L NC_ Maier et al. Eudicots:Arabidopsis thaliana (L.) Heynh NC_ Sato et al.Atropa belladonna L NC_ Schmitz-Linneweber et al.Calycanthus floridus L. var. glaucus (Willd.) Torr. A. Gray; NC_ Goremykin et alunpublished (Goremykin, VK. Hirsch-Ernst, S. Wolfl, and F. Hellwig. Comprehensive structure of the chloroplast genome of Calycanthus fertilis. Direct GenBank submission July).Lotus japonicus (Regel) K. Larsen; AP Kato et al.Medicago truncatula Gaertn NC_ Lin et alunpublished (Lin, SH. Wu, H. Jia, P. Zhang, R. Dixon, G. May possibly, R. Gonzales, and B. A. Roe. Medicago truncatula variety Jema Lengthy A- chloroplast, complete sequence. Direct GenBank submission August).Nicotiana tabacum L Z Shinozaki et al. Note: this sequence has been updated given that this short article was published.Nymphaea alba L NC_ Goremykin et al.Oenothera elata Kunth subsp. hookeri (Torr. A. Gray) W. Dietr. W. L. Wagner; NC_ Hupfer et al. Note: this sequence has been updated given that this article was published.Spinacia oleracea L NC_ Schmitz-Linneweber et al.http:bioone.orgloiapps ofApplications in Plant Sciences : doi:.apps.APPENDIX .Prince–Plastid primers for phylogeneticsComparison of chloroplast regions with published primer pairs.Genomic region trnH(GUG)-psbA psbA exon psbA-trnK(UUU) trnK(UUU)-matK matK exon matK-trnK trnK(UUU)-rps rps intron rps-trnQ(UUG) trnQ(UUG)-psbK psbK-trnS(GCU) trnS(GCU)-trnG(UCC) and intron trnG(UCC) intron trnG(UCC)-atpA atpA exon atpA-atpF atpF intron atpF-atpH atpH-atpI atpI exon atpI-rps rps exon rps-rpoC rpoC-rpoC rpoC intronexon rpoC exon rpoB exon rpoB-trnC(GCU) trnC(GCU)-ycf trnC(GCU)-petN petN-trnD petN-psbM ycf-psbM psbM-trnD(GUC) trnD(GUC)-trnT(GGU) trnT(GGU)-psbD psbD exon psbC exon psbC-psbZ trnS(UGA)-trnG(GCC) trnG(GCC)-rpS trnS(UGA)-trnfM trnS(UGA)-psbZ psbZ-trnfM(CAU) trnfM(CAU)-psaB psaB exon psaA exon psaA-ycf ycf intron ycf intron ycf-trnS(GGA) ycf-rps trnS(GGA)-rpS-trnT(UGU) rpS-trnT(UGU) trnT(UGU)-trnL(UAA) trnL(UAA) intron trnL(UAA)-trnF(GAA) trnL(UAA)-ndhJ trnF(GAA)-ndhJ ndhJ-ndhC ndhC-trnV(UAC).
