Ulakh S, Paetzel M: The bacterial outer membrane -barrel Assembly machinery. Protein Sci 2012, 21:75168. 5. Sklar JG, Wu T, Kahne D, Silhavy TJ: Defining the roles of your periplasmic chaperones SurA, Skp, and DegP in Escherichia coli. Genes Dev 2007, 21:2473. six. Hagan CL, Kim S, Kahne D: Reconstitution of outer membrane protein assembly from purified elements. Science (New York, NY) 2010, 328:89092. 7. Anwari K, Webb CT, Poggio S, Perry AJ, Belousoff M, Celik N, Ramm G, Lovering A, GM1485 Formula Sockett RE, Smit J, Jacobs-Wagner C, Lithgow T: The evolution of new lipoprotein subunits of your bacterial outer membrane BAM complicated. Mol Microbiol 2012, 84:83244. 8. Robert V, Volokhina EB, Senf F, Bos MP, Van Gelder P, Tommassen J: Assembly aspect Omp85 recognizes its outer membrane protein substrates by a species-specific C-terminal motif. PLoS Biol 2006, four:e377.16.17. 18.19. 20.21.22.23.24.25. 26.27.28.29.30. 31.32.Sandoval CM, Baker SL, Jansen K, Metzner SI, Sousa MC: Crystal Structure of BamD: An Necessary Element of the -Barrel Assembly Machinery of Gram-Negative Bacteria. J Mol Biol 2011, 409:34857. StruyvM, Moons M, Tommassen J: Carboxy-terminal phenylalanine is essential for the right assembly of a bacterial outer membrane protein. J Mol Biol 1991, 218:14148. Hendrixson DR, De La Morena ML, Stathopoulos C, St Geme Iii JW: Structural determinants of processing and secretion of your Haemophilus influenzae Hap protein. Mol Microbiol 1997, 26:50518. Yu NY, Wagner JR, Laird MR, Melli G, Rey S, Lo R, Dao P, Sahinalp SC, Ester M, Foster LJ, Brinkman FSL: PSORTb three.0: enhanced protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes. Bioinformatics 2010, 26:1608615. Yu C-S, Chen Y-C, Lu C-H, Hwang J-K: Prediction of protein subcellular localization. Proteins 2006, 64:64351. Remmert M, Linke D, Lupas AN, S ing J: HHomp rediction and classification of outer membrane proteins. Nucleic Acids Res 2009, 37:W446 451. Koebnik R, Locher KP, Van Gelder P: Structure and function of bacterial outer membrane proteins: barrels within a nutshell. Mol Microbiol 2000, 37:23953. Hritonenko V, Stathopoulos C: Omptin proteins: an expanding family of outer membrane proteases in Gram-negative Enterobacteriaceae (Evaluation). Mol Membr Biol 2007, 24:39506. van den Berg B, Black PN, Clemons WM, Rapoport TA: Crystal Structure of the Long-Chain Fatty Acid Transporter FadL. Science 2004, 304:1506509. Bigelow HR, Petrey DS, Liu J, Przybylski D, Rost B: Predicting transmembrane beta-barrels in proteomes. Nucleic Acids Res 2004, 32:2566577. Jones DT: Protein secondary structure prediction primarily based on positionspecific scoring matrices. J Mol Biol 1999, 292:19502. Frickey T, Lupas A: CLANS: a Java application for visualizing protein households primarily based on pairwise similarity. Bioinformatics (Oxford, England) 2004, 20:3702704. Remmert M, Biegert A, Linke D, Lupas AN, S ing J: Evolution of outer membrane beta-barrels from an ancestral beta beta Salicyluric acid Endogenous Metabolite hairpin. Mol Biol Evol 2010, 27:1348358. Lehr U, Sch z M, Oberhettinger P, Ruiz-Perez F, Donald JW, Palmer T, Linke D, Henderson IR, Autenrieth IB: C-terminal amino acid residues on the trimeric autotransporter adhesin YadA of Yersinia enterocolitica are decisive for its recognition and assembly by BamA. Mol Microbiol 2010, 78:93246. Fischer W, Schwan D, Gerland E, Erlenfeld GE, Odenbreit S, Haas R: A plasmid-based vector program for the cloning and expression of Helicobacter pylori genes.
